The detailed information of tRNA gene sequence


Sequence ID>W2010570451
Genome IDJAATWC010000008
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDissulfurirhabdus thermomarina SH388 [JAATWC]
Start position on genome 58507
End posion on genome 58416
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgaacgggac
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCCGAAGGTGCTCGCCTGCTAAGTGAGTGTGCGCCCAAAAGCG
CACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tacatagccg
Secondary structure (Cloverleaf model)
>W2010570451	Ser	GCT
                   c      GCCA tacatagccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGCCCAAAAGCGCACC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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