The detailed information of tRNA gene sequence


Sequence ID>W2010572230
Genome IDJAAVJJ010000001
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus ferrooxydans O-1 [JAAVJJ]
Start position on genome 470776
End posion on genome 470700
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tgtttcctcc
tRNA gene sequence 
GCCCTCGTAGCTCAGCTGGATAGAGCGGTCGCCTCCTAAGCGACAGGCCGTGCGTTCGAA
TCGCGCCGAGGGCACCA
Downstream region at tRNA end position 
gttaatgttt
Secondary structure (Cloverleaf model)
>W2010572230	Arg	CCT
                   c      ACCA gttaatgttt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C G C     A
      C G A        A      | + | | |     G
    T       C T C G       G T G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    G - C
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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