The detailed information of tRNA gene sequence


Sequence ID>W2010572234
Genome IDJAAVJJ010000002
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus ferrooxydans O-1 [JAAVJJ]
Start position on genome 26636
End posion on genome 26725
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtacacgtac
tRNA gene sequence 
GGAGAGATGGCTGAGTGGCCGAAAGCGCGCCCCTGCTAAGGGTGTATAGGCTAAAACCTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tacaataaaa
Secondary structure (Cloverleaf model)
>W2010572234	Ser	GCT
                   c      GCCA tacaataaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TATAGGCTAAAACCTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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