The detailed information of tRNA gene sequence


Sequence ID>W2010572238
Genome IDJAAVJJ010000003
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus ferrooxydans O-1 [JAAVJJ]
Start position on genome 97302
End posion on genome 97391
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagggatat
tRNA gene sequence 
GGAGAGATGTCTGAGCGGTCGAAGGAGCACGCCTGGAAAGCGTGTGTACGTGAAAGCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gtttaaacga
Secondary structure (Cloverleaf model)
>W2010572238	Ser	GGA
                   t      GCCA gtttaaacga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    T       A G G A
      C G A        G     TGTACGTGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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