The detailed information of tRNA gene sequence


Sequence ID>W2010572239
Genome IDJAAVJJ010000003
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus ferrooxydans O-1 [JAAVJJ]
Start position on genome 141178
End posion on genome 141253
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tggaacactg
tRNA gene sequence 
GCCGATGTAGCTCAGTTGGTAGAGCATCTCACTCGTAATGAGAAGGTCTCCGGTTCGATT
CCGGACATCGGCTCCA
Downstream region at tRNA end position 
gtatgaatca
Secondary structure (Cloverleaf model)
>W2010572239	Thr	CGT
                   g      TCCA gtatgaatca
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     A G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       T C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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