The detailed information of tRNA gene sequence


Sequence ID>W2010572244
Genome IDJAAVJJ010000004
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus ferrooxydans O-1 [JAAVJJ]
Start position on genome 53508
End posion on genome 53584
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gaaagctgac
tRNA gene sequence 
GGGCTCATGGCGCAATTGGTTAGCGCAACCGGCTCATAACCGGTTGGTTCTAGGTTCGAG
TCCTAGTGAGCCCACCA
Downstream region at tRNA end position 
cataagaaaa
Secondary structure (Cloverleaf model)
>W2010572244	Ile2	CAT
                   c      ACCA cataagaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     G A T C C     A
      T A A        G      | | | | |     G
    T       C G C G       C T A G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        A     TGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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