The detailed information of tRNA gene sequence


Sequence ID>W2010572255
Genome IDJAAVJJ010000005
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus ferrooxydans O-1 [JAAVJJ]
Start position on genome 248823
End posion on genome 248898
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tgtttttttc
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGGAGAGCAACGGCCTTACAAGCCGTAGGTCGCAGGTTCGAAC
CCTGCAGCGCCCACCA
Downstream region at tRNA end position 
tttaagcccg
Secondary structure (Cloverleaf model)
>W2010572255	Val	TAC
                   c      ACCA tttaagcccg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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