The detailed information of tRNA gene sequence


Sequence ID>SRA1036335
Genome IDSRR035089.497240
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 180
End posion on genome 93
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tccgaatatg
tRNA gene sequence 
GTGGCTGTGGCGAAATAGGTAGACGCGCAAAGCTGTGGCCTTTGTATCCTAATTAGGATG
TGCGAGTTCGATTCTCGCCAGTCACCCAa
Downstream region at tRNA end position 
atgataagga
Secondary structure (Cloverleaf model)
>SRA1036335	His	GTG
                   g      CCAa atgataagga
                     G - C
                     T - A
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          T T
                    T     C G C T C     A
      T A A        G      | | | | |     G
    A       A G C G       G C G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATCCTAATTAGGATGT
                    C - G
                    A - T
                    A - T
                    A - T
                    G - C
                  C       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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