The detailed information of tRNA gene sequence


Sequence ID>SRA1036532
Genome IDSRR035089.540265
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 5
End posion on genome 81
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnattt
tRNA gene sequence 
GGCGTCGTACCCAAGTGGTCCAAGGGAGCAGTTTGCAAAACTGTCATTCGCCGGTTCGAA
TCCGGCCGACGCCTCGA
Downstream region at tRNA end position 
ttattgcccg
Secondary structure (Cloverleaf model)
>SRA1036532	Cys	GCA
                   t      TCGA ttattgcccg
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | | | | |     G
    G       A C C C       G C C G G     C
    G         | | |                 T T
    T       A G G G
      C C A        A     CATTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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