The detailed information of tRNA gene sequence


Sequence ID>W2010592961
Genome IDJABEPJ010000010
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas sp. NEC-BIFX-2020_002 [JABEPJ]
Start position on genome 201667
End posion on genome 201578
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggtaacctgc
tRNA gene sequence 
GGAGGGATGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTTATCCCTA
ACGAGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
ctattcaata
Secondary structure (Cloverleaf model)
>W2010592961	Ser	GGA
                   c      GCCA ctattcaata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TTTAGGTTTATCCCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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