The detailed information of tRNA gene sequence


Sequence ID>SRA1036645
Genome IDSRR035089.571306
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 340
End posion on genome 250
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaataattt
tRNA gene sequence 
GGAAGAGTGTCCGAGTGGCTGAAGGAGCACGATTGGAAATCGTGTATATCGTGTTGAACG
GTATCCCGGGTTCAAATCCCGGCTCTTCCGCtt
Downstream region at tRNA end position 
tttttgtaat
Secondary structure (Cloverleaf model)
>SRA1036645	Ser	GGA
                   t      GCtt tttttgtaat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     A
    G       G C C T       C C G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATATCGTGTTGAACGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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