The detailed information of tRNA gene sequence


Sequence ID>SRA1036690
Genome IDSRR035089.585121
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 347
End posion on genome 257
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atattaaaac
tRNA gene sequence 
GGAACGGTGCCTGAGTGGTTTAAAGGGGTAGTTTGCTAAACTGCTGACCCTCACAAGGGG
TCCGTGGGTTCGAATCCCGCCTGTTCCGCCA
Downstream region at tRNA end position 
ccttaaaaat
Secondary structure (Cloverleaf model)
>SRA1036690	Ser	GCT
                   c      GCCA ccttaaaaat
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G + T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | + | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    T       A A G G
      T T A        G     TGACCCTCACAAGGGGTCC
                    G - C
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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