The detailed information of tRNA gene sequence


Sequence ID>SRA1037219
Genome IDSRR035090.94562
Search identical group
Phylum/Class454 Sequencing (SRP001811)
Species
Start position on genome 5
End posion on genome 96
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnngttt
tRNA gene sequence 
GGAGAGTTACCCAAGAGGCTGAAGGGGCGGGTTTGCTAAATCTGTAGGGTGGTTTTACTG
CCGCGAGAGTTCGAATCTCTCACTCTCCGCCA
Downstream region at tRNA end position 
ttaatccctt
Secondary structure (Cloverleaf model)
>SRA1037219	Ser	GCT
                   t      GCCA ttaatccctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
      A G A        A      | | | | |     G
    G       A C C C       G A G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGGTGGTTTTACTGCCGC
                    C - G
                    G + T
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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