The detailed information of tRNA gene sequence


Sequence ID>W2010666459
Genome IDJACBXS010000017
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodobacteraceae bacterium 2376 [JACBXS]
Start position on genome 341
End posion on genome 252
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggggtcagc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCCCGGAAGGGTC
TCGTGGGTTCGAATCCCATCGTCTCCGCCA
Downstream region at tRNA end position 
ttttcttgac
Secondary structure (Cloverleaf model)
>W2010666459	Ser	GCT
                   c      GCCA ttttcttgac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCCCGGAAGGGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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