The detailed information of tRNA gene sequence


Sequence ID>W2010711027
Genome IDJACHNH010000001
Search identical group
Phylum/ClassActinomycetota
SpeciesActinoplanes digitatis DSM 43149 [JACHNH]
Start position on genome 1288977
End posion on genome 1289052
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcggcgcacg
tRNA gene sequence 
CGCAGGGTGGAGCAGTTCGGAGTGCTCGCAGGTTTCATATGCCTGAGGTCGCGGGTTCAA
ATCCCGTCCCTGCAACga
Downstream region at tRNA end position 
aagcagttcc
Secondary structure (Cloverleaf model)
>W2010711027	fMet	CAT
                   g      ACga aagcagttcc
                     C   A
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    T T G A        G      + | | | |     A
  C         C G A G       G C G G G     C
  G         | | | |                 T T
  G         G C T C
    A G T          G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  T       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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