The detailed information of tRNA gene sequence


Sequence ID>W2010712129
Genome IDJACHOD010000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParacoccus denitrificans DSM 104981 [JACHOD]
Start position on genome 47516
End posion on genome 47440
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcgacaggtc
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCGACGGTTTTGGGTACCGTAGGCCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ctttcctttc
Secondary structure (Cloverleaf model)
>W2010712129	Pro	TGG
                   c      ACCA ctttcctttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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