The detailed information of tRNA gene sequence


Sequence ID>W2010759850
Genome IDJPWC01000023
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThalassospira profundimaris R4-5 [JPWC]
Start position on genome 37
End posion on genome 112
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acgatcttgt
tRNA gene sequence 
AGGAGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGTGTCGGGGGTTCGAGT
CCCTCCTCTCCTGCCA
Downstream region at tRNA end position 
atttttccgg
Secondary structure (Cloverleaf model)
>W2010759850	Trp	CCA
                   t      GCCA atttttccgg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T   T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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