The detailed information of tRNA gene sequence


Sequence ID>SRA1038510
Genome IDSRR035090.318495
Search identical group
Phylum/Class454 Sequencing (SRP001811)
Species
Start position on genome 161
End posion on genome 70
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtaaaaaac
tRNA gene sequence 
GGAGGGTTGGCCGAGAGGCCGAAGGCGCTCCCCTGCTAAGGGAGTAACTGGCGAAAGCTG
GTTCCAGAGTTCGAATCTCTGACCCTCCGCCA
Downstream region at tRNA end position 
ttttttaaaa
Secondary structure (Cloverleaf model)
>SRA1038510	Ser	GCT
                   c      GCCA ttttttaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     G T C T C     A
      A G A        G      | | | | |     G
    G       G C C G       C A G A G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TAACTGGCGAAAGCTGGTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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