The detailed information of tRNA gene sequence


Sequence ID>W2010860548
Genome IDMGSG01000195
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDeltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8 [MGSG]
Start position on genome 1209
End posion on genome 1115
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggtctcgtat
tRNA gene sequence 
GGAAGAGGATAGGGCCCGGTGGCCCTGCCGGTCTTCAAAACCGGTCGTAACCGCGAGCCG
GGACAGGGGGGTTCGACTCCCTCCCTCTTCCGCCA
Downstream region at tRNA end position 
gttactcgtg
Secondary structure (Cloverleaf model)
>W2010860548	SeC	TCA
                   t      GCCA gttactcgtg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    A     C T C C C     A
      C C C        T      | + | | |     G
    G       G G G A       G G G G G     C
    G       | | | |                 T T
    T       C C C T
      G G          G     TCGTAACCGCGAGCCGGGACAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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