The detailed information of tRNA gene sequence


Sequence ID>W2010860641
Genome IDMGSJ01000184
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDeltaproteobacteria bacterium RIFCSPLOWO2_12_55_13 [MGSJ]
Start position on genome 5246
End posion on genome 5322
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aatcgccagt
tRNA gene sequence 
GGTCGCATAGCTCAGCTGGTTAGAGCGCTCGCTTCACATGCGAGAGGTCGCAGGTTCAAG
TCCTGCTGCGACCACCA
Downstream region at tRNA end position 
taaaatcaat
Secondary structure (Cloverleaf model)
>W2010860641	Val	CAC
                   t      ACCA taaaatcaat
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     A - T          T G
                    T     C G T C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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