The detailed information of tRNA gene sequence


Sequence ID>W2010860747
Genome IDMGSM01000097
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDeltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_42_16 [MGSM]
Start position on genome 436
End posion on genome 512
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gatagcgtat
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGCTAGAGCGTCGGTCTCCAAAACCGAGTGTTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
agcttagctt
Secondary structure (Cloverleaf model)
>W2010860747	Trp	CCA
                   t      GCCA agcttagctt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     GTGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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