The detailed information of tRNA gene sequence


Sequence ID>SRA1039167
Genome IDSRR035090.436099
Search identical group
Phylum/Class454 Sequencing (SRP001811)
Species
Start position on genome 7
End posion on genome 99
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnngcacaa
tRNA gene sequence 
GGAGAGATGGCCGAGTCGGCTGAAGGCGCTCGCCTGCTAAGCGAGTGTACACCTTAAAGT
GTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttagaatcct
Secondary structure (Cloverleaf model)
>SRA1039167	Ser	GCT
                   a      GCCA ttagaatcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTACACCTTAAAGTGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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