The detailed information of tRNA gene sequence


Sequence ID>W2010864504
Genome IDMHDJ01000101
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPHIGHO2_12_FULL_39_42 [MHDJ]
Start position on genome 3827
End posion on genome 3739
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttagtgtttT
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTTATAACGGGCCCGACTCGAAATCGGGTTGGCTTAACAGCCA
CGTGGGTTCGAATCCCACCCTCTCCGTCa
Downstream region at tRNA end position 
caaagacaac
Secondary structure (Cloverleaf model)
>W2010864504	Ser	CGA
                   T      GTCa caaagacaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  T         A C G G
    A T A          G     TTGGCTTAACAGCCAC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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