The detailed information of tRNA gene sequence


Sequence ID>W2010864738
Genome IDMHDQ01000076
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22 [MHDQ]
Start position on genome 5622
End posion on genome 5713
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatgacaggC
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGAAGGCGGTTGATTCGAAATCAATTGAGCGGTTAATCCTG
CTCCGGGGGTTCGAATCCCTCTCTCTCCGTCa
Downstream region at tRNA end position 
ataaaagaat
Secondary structure (Cloverleaf model)
>W2010864738	Ser	CGA
                   C      GTCa ataaaagaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGAGCGGTTAATCCTGCTCC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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