The detailed information of tRNA gene sequence


Sequence ID>SRA1039242
Genome IDSRR035090.450029
Search identical group
Phylum/Class454 Sequencing (SRP001811)
Species
Start position on genome 22
End posion on genome 113
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttggtaact
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGCTTAAGAGGCACGCTTGGAAAGCGTGTGTGCGCCAAAAGCGT
AACCGCGGGTTCGAATCCCGCCTTCTCCGCAA
Downstream region at tRNA end position 
ggatttaaga
Secondary structure (Cloverleaf model)
>SRA1039242	Ser	GGA
                   t      GCAA ggatttaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    C       A G A G
      T T A        G     TGTGCGCCAAAAGCGTAACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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