The detailed information of tRNA gene sequence


Sequence ID>W2010870668
Genome IDMHOE01000024
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Spechtbacteria bacterium RIFCSPHIGHO2_02_FULL_43_15b [MHOE]
Start position on genome 48732
End posion on genome 48660
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aggcgttcgc
tRNA gene sequence 
CGCGGGGGGAAGGTATGGTATCTTGCAGGGCTCATAACCCTGATAAAGGGGGTTCAATTC
CCTCCCCCGCAACat
Downstream region at tRNA end position 
ttccgactcc
Secondary structure (Cloverleaf model)
>W2010870668	fMet	CAT
                   c      ACat ttccgactcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    G     C T C C C     A
        A T        G      | + | | |     A
      T     G G A A       G G G G G     C
      G     + | | |                 T T
      G     T C T T
        T A        G     ATAAA
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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