The detailed information of tRNA gene sequence


Sequence ID>SRA1039478
Genome IDSRR035090.500353
Search identical group
Phylum/Class454 Sequencing (SRP001811)
Species
Start position on genome 159
End posion on genome 248
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgcgctcgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAACGCGCACGCTTGGAAAGCGTGTGTACGAGCAATCGTA
CCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
gttttaattt
Secondary structure (Cloverleaf model)
>SRA1039478	Ser	GGA
                   c      GCCA gttttaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G C G G G     C
    G           | |                 T T
    T       A C G C
      C G A        G     TGTACGAGCAATCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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