The detailed information of tRNA gene sequence


Sequence ID>SRA1039546
Genome IDSRR035090.512936
Search identical group
Phylum/Class454 Sequencing (SRP001811)
Species
Start position on genome 257
End posion on genome 333
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attgaattgc
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCGAA
TCCAGCCCCCGCTACCA
Downstream region at tRNA end position 
aaaacaaatt
Secondary structure (Cloverleaf model)
>SRA1039546	Met	CAT
                   c      ACCA aaaacaaatt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | + | | |     G
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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