The detailed information of tRNA gene sequence


Sequence ID>W2010917960
Genome IDMVOI01000006
Search identical group
Phylum/ClassRhodothermota
SpeciesRubrivirga sp. SAORIC476 [MVOI]
Start position on genome 494843
End posion on genome 494918
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttgcggctcc
tRNA gene sequence 
GGGCTCGTAGCACAACGGTTAGTGCAGCCGGCTCATAACCGGACGGTTGCAGGTTCAAAT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tgcgcatctc
Secondary structure (Cloverleaf model)
>W2010917960	Ile2	CAT
                   c      ACCA tgcgcatctc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C A A        A      | | | | |     A
    G       C A C G       G C A G G     C
    G       | | | |                 T T
    T       G T G C
      T A          A     CGGTT
                    G   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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