The detailed information of tRNA gene sequence


Sequence ID>SRA1039803
Genome IDSRR035090.573584
Search identical group
Phylum/Class454 Sequencing (SRP001811)
Species
Start position on genome 156
End posion on genome 230
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gaacatcacc
tRNA gene sequence 
GGGCGATTAACTCAGTGGGAGAGTGCCATCCTCACACGGTGGAAGTCCGGGGTTCAAATC
CCCGATCGCCCACCA
Downstream region at tRNA end position 
ccttgaaatt
Secondary structure (Cloverleaf model)
>SRA1039803	Val	CAC
                   c      ACCA ccttgaaatt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     G C C C C     A
        G A        A      | | | | |     A
      T     C T C A       C G G G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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