The detailed information of tRNA gene sequence


Sequence ID>SRA1039827
Genome IDSRR035090.579397
Search identical group
Phylum/Class454 Sequencing (SRP001811)
Species
Start position on genome 145
End posion on genome 52
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tattttatgc
tRNA gene sequence 
GGAGAGATGTCCGAGTTGGCCGAAGGAGCGCGACTGGAAATCGCGTGTACTGTCAATAGC
GGTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tagttttgat
Secondary structure (Cloverleaf model)
>SRA1039827	Ser	GGA
                   c      GCCA tagttttgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  C         A G G A
    C G A          G     TGTACTGTCAATAGCGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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