The detailed information of tRNA gene sequence


Sequence ID>SRA1039886
Genome IDSRR035090.592460
Search identical group
Phylum/Class454 Sequencing (SRP001811)
Species
Start position on genome 83
End posion on genome 6
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgatgaatgc
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGCTAGAGCACCGGACTCCAAATCCGGGTGATGGGGGGTTCGA
ATCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tttttnnnnn
Secondary structure (Cloverleaf model)
>SRA1039886	Trp	CCA
                   c      GCCA tttttnnnnn
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGATG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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