The detailed information of tRNA gene sequence


Sequence ID>W2010939918
Genome IDNCWX01000013
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesStenotrophomonas rhizophila OG2 [NCWX]
Start position on genome 2313
End posion on genome 2239
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gacaaagcat
tRNA gene sequence 
GCTCCCTTCGTCTAGAGGTTAGGACGTGGCCCTCTCAAGGCTAAAACAGGGGTTCGAGTC
CCCTAGGGAGCACCA
Downstream region at tRNA end position 
tttgccgcgc
Secondary structure (Cloverleaf model)
>W2010939918	Glu	CTC
                   t      ACCA tttgccgcgc
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    T - A
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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