The detailed information of tRNA gene sequence


Sequence ID>SRA1040042
Genome IDSRR035091.24600
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 159
End posion on genome 84
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
GGCCAGGTAGCCAAGTGGCTAAGGCGTCGGTTTGCAAAACCGATATACACGGGTTCGACT
CCCGTCCTGGCCTCCT
Downstream region at tRNA end position 
ccttcatttc
Secondary structure (Cloverleaf model)
>SRA1040042	Cys	GCA
                   a      TCCT ccttcatttc
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T C
                    T     T G C C C     A
      T G A        A      | | | | |     G
    G       A C C G       A C G G G     C
    G         | | |                 T T
    C       A G G C
      T A          G     TATAC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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