The detailed information of tRNA gene sequence


Sequence ID>SRA1040161
Genome IDSRR035091.50335
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 276
End posion on genome 186
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgggctcagg
tRNA gene sequence 
CGAGGGATGGCTGAGTGGCCGAAGGCACCCGACTCGAAATCGGACGGGCGTTAATCGCGT
CCCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
ttcccccttt
Secondary structure (Cloverleaf model)
>SRA1040161	Ser	CGA
                   g      GCCA ttcccccttt
                     C   C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G T G G G     C
    G         + | |                 T T
    C       A G G C
      C G A        A     CGGGCGTTAATCGCGTCCC
                    C   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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