The detailed information of tRNA gene sequence


Sequence ID>SRA1040228
Genome IDSRR035091.63197
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 203
End posion on genome 275
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctgggccgtt
tRNA gene sequence 
GCGCGGGTCGCATAGCGGCTATTGCGCTTCCCTGCAGAGGAAGTATCCGCGGGTTCGAGT
CCCGCCCCGCGCTttt
Downstream region at tRNA end position 
tttgaatatn
Secondary structure (Cloverleaf model)
>SRA1040228	Cys	GCA
                   t      Tttt tttgaatatn
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G         | | |                 T T
    C       T T G C
      T A          G     TATCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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