The detailed information of tRNA gene sequence


Sequence ID>SRA1040321
Genome IDSRR035091.78742
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 316
End posion on genome 240
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
acaccacaac
tRNA gene sequence 
GCTCGTGTGGCTCAGTTGGTTAGAGTGCACCGTTCACATCGGTGAGGTCCCTGGTTCGAG
TCCAGGCACGAGCACAA
Downstream region at tRNA end position 
ataagtaatt
Secondary structure (Cloverleaf model)
>SRA1040321	Val	CAC
                   c      ACAA ataagtaatt
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C          T G
                    T     G G A C C     A
      T G A        G      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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