The detailed information of tRNA gene sequence


Sequence ID>SRA1040326
Genome IDSRR035091.78844
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 167
End posion on genome 94
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tagcccatta
tRNA gene sequence 
GGGAACGTAGTATAGTTGGCCAACATGTCTGCCTCCAAAACAGAAGATCATGAGTTCGAA
TCTCATCGTTCCCAttt
Downstream region at tRNA end position 
gccactgtgg
Secondary structure (Cloverleaf model)
>SRA1040326	Trp	CCA
                   a      Attt gccactgtgg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     T A C T C     A
      T G A        A      | | | | |     G
    T       T A T G       A T G A G     C
    G       |   | +                 T T
    G       A C A T
      C C A        G     AGATC
                    T - A
                    C - G
                    T - A
                    G - C
                    C   A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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