The detailed information of tRNA gene sequence


Sequence ID>SRA1040366
Genome IDSRR035091.85226
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 254
End posion on genome 178
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tataatgtaa
tRNA gene sequence 
GGGTCCTTGGTGTAACGGTACTAGCATAACTGGCTCCAACCCAGTTGGTAGGGGTTCGAA
TCCTCTAGGACCTGCCA
Downstream region at tRNA end position 
aaaaaggaga
Secondary structure (Cloverleaf model)
>SRA1040366	Trp	CCA
                   a      GCCA aaaaaggaga
                     G + T
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     T C T C C     A
    G C A A        G      | | + | |     G
  G         T G T G       A G G G G     C
  T         + | | +                 T T
  A         G C A T
    C T A          A     TGGT
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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