The detailed information of tRNA gene sequence


Sequence ID>SRA1040425
Genome IDSRR035091.95836
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 271
End posion on genome 359
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcaaaaataA
tRNA gene sequence 
GGAAAGGTGGCAGAGCGGCTGAATGCACTGCTTTCGAAAAGCAGCAACCTTGCAAAAAGG
TTCGCGGGTTCAAATCCCGCCTTTCCGCat
Downstream region at tRNA end position 
aaaaacaana
Secondary structure (Cloverleaf model)
>SRA1040425	Ser	CGA
                   A      GCat aaaaacaana
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          A A
                    T     G C C C T     A
      C G A        G      | |   | +     C
    G       G A C G       C G C G G     T
    G         | | |                 G T
    C       A T G C
      T G A        A     CAACCTTGCAAAAAGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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