The detailed information of tRNA gene sequence


Sequence ID>SRA1040458
Genome IDSRR035091.100792
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 40
End posion on genome 113
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaactgttaa
tRNA gene sequence 
GGGGATATGGTACAATGGTAGTATATCCGGCTCCAACCCGGAAGATGCATGTTCAATTCG
TGCTATCCCCATCA
Downstream region at tRNA end position 
gaagttgttt
Secondary structure (Cloverleaf model)
>SRA1040458	Trp	CCA
                   a      ATCA gaagttgttt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     C G T G C     A
        A A        G      | | | + |     A
      T     C A T G       G C A T G     C
      G     | | | +                 T T
      G     G T A T
        T A        A     AGAT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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