The detailed information of tRNA gene sequence


Sequence ID>SRA1040469
Genome IDSRR035091.102324
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 90
End posion on genome 163
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagttaatct
tRNA gene sequence 
AGGGGTGTAGTTCAATGGTAGAACAGGGCTCTCCAAAAGCTCTGATGAGGGTTCGATTCC
TTCCACCCCTGCAA
Downstream region at tRNA end position 
ttctctttcc
Secondary structure (Cloverleaf model)
>SRA1040469	Trp	CCA
                   t      GCAA ttctctttcc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C T T C C     A
        A A        A      | | + | |     G
      T     C T T G       G A G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     TGAT
                    G - C
                    G + T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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