The detailed information of tRNA gene sequence


Sequence ID>SRA1040477
Genome IDSRR035091.103543
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 110
End posion on genome 183
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ctccactttt
tRNA gene sequence 
GGGCTTGTAGGTAAGTGGTATACCGCAGTCTTCGCATGACTGAGTCCCGAGTTCGATTCT
CGGCAGGTCCACTA
Downstream region at tRNA end position 
ctagttactg
Secondary structure (Cloverleaf model)
>SRA1040477	Ala	CGC
                   t      ACTA ctagttactg
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     T - A
                     G - C          T T
                    T     G G C T C     A
        G A        A      | | | | |     G
      T     A T G G       C C G A G     C
      G     | | | |                 T T
      G     T A C C
        T A        G     AGTC
                    C - G
                    A - T
                    G - C
                    T - A
                    C - G
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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