The detailed information of tRNA gene sequence


Sequence ID>SRA1040480
Genome IDSRR035091.103643
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 164
End posion on genome 89
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cattatcata
tRNA gene sequence 
GCTCGGTTGGCGGAATCTGGTGAACGCGCTAGACTGCAAATCTGGAGACTATGGGTTCAA
ATCCCATACCGAGCTCat
Downstream region at tRNA end position 
ttactgctgt
Secondary structure (Cloverleaf model)
>SRA1040480	Cys	GCA
                   a      TCat ttactgctgt
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
    C T A A        G      | | | | |     A
  T         G G C G       A T G G G     C
  G           | | |                 T T
  G         A C G C
    T G A          G     AGACT
                    C - G
                    T + G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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