The detailed information of tRNA gene sequence


Sequence ID>SRA1040488
Genome IDSRR035091.104869
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 281
End posion on genome 354
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attttttgat
tRNA gene sequence 
GGGGGAGTATTTCAGTGGTAGAATACGGGTCTCCAAAACCTGGGACGAGGGTTCAATTCC
TTCCTCCCCTGCCA
Downstream region at tRNA end position 
tcctgcaata
Secondary structure (Cloverleaf model)
>SRA1040488	Trp	CCA
                   t      GCCA tcctgcaata
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     C T T C C     A
        G A        A      | | + | |     A
      T     C T T T       G A G G G     C
      G     | | |                   T T
      G     G A A T
        T A        A     GGAC
                    C - G
                    G + T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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