The detailed information of tRNA gene sequence


Sequence ID>SRA1040498
Genome IDSRR035091.106183
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 183
End posion on genome 259
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgctcattaa
tRNA gene sequence 
AGGCCAGTAGCTCTAATTGGCAGAGCAGCGGTCTCCAAAGCCGCGTGTTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ccttggnnnn
Secondary structure (Cloverleaf model)
>SRA1040498	Trp	CCA
                   a      GCCA ccttggnnnn
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GTGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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