The detailed information of tRNA gene sequence


Sequence ID>SRA1040643
Genome IDSRR035091.126664
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 149
End posion on genome 66
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctaatataT
tRNA gene sequence 
GCCTCAGTCGCATAACGGTTATTGCACCGGTTTGCTAAATCGGGCCCTTCGGGGCGAGTA
GGTTCGACTCCTGCCTGAGGCGTtt
Downstream region at tRNA end position 
atcgtcgaac
Secondary structure (Cloverleaf model)
>SRA1040643	Ser	GCT
                   T      GTtt atcgtcgaac
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T C
                    T     C G T C C     A
      C A A        C      | + | | |     G
    G       T A C G       G T A G G     C
    G         | | |                 T T
    T       T T G C
      T A          A     GCCCTTCGGGGCGA
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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