The detailed information of tRNA gene sequence


Sequence ID>SRA1040704
Genome IDSRR035091.135122
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 6
End posion on genome 93
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnataat
tRNA gene sequence 
GGAGAGATGCGTGAGCGGCTTAAACGGCACGCTTGGAAAGCGTGTGTACTTAACGGTACC
CTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
ttctgcttcg
Secondary structure (Cloverleaf model)
>SRA1040704	Ser	GGA
                   t      GCCA ttctgcttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G T G C       C T G G G     C
    G         | | |                 T T
    C       A A C G
      T T A        G     TGTACTTAACGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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