The detailed information of tRNA gene sequence


Sequence ID>SRA1040731
Genome IDSRR035091.138811
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 372
End posion on genome 467
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tataattagt
tRNA gene sequence 
GGAGAGGTCGCATAGCCCGGTTTAGTGCGGCGGTTTGCTAAACCGCTGTATGGGTGAAAA
CCCGTACCCAGGGTTCAAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
ttgttgnnnn
Secondary structure (Cloverleaf model)
>SRA1040731	Ser	GCT
                   t      GCCA ttgttgnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    C C G A        C      | | | | |     A
  C         T A C G       C A G G G     C
  G         + | | |                 T T
  G         G T G C
    T T T A        G     TGTATGGGTGAAAACCCGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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