The detailed information of tRNA gene sequence


Sequence ID>SRA1040745
Genome IDSRR035091.141791
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 226
End posion on genome 315
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgcctgcgc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGATTGGGACACACTGCTAATGTGTTGACTGGGCAACTGGT
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgaagtacag
Secondary structure (Cloverleaf model)
>SRA1040745	Ser	GCT
                   c      GCCA tgaagtacag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TGACTGGGCAACTGGTCC
                    A - T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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